Nextflow workflow report

[small_mccarthy] (resumed run)

Workflow execution completed successfully!
Run times
12-Sep-2023 10:20:57 - 12-Sep-2023 10:21:32 (duration: 34.5s)
  9 succeeded  
  2063 cached  
  0 ignored  
  0 failed  
Nextflow command
nextflow run main.nf -profile test_medium,conda -resume
CPU-Hours
44.4 (99.9% cached)
Launch directory
/media/fosterz/external_primary/files/projects/work/current/pathogensurveillance
Work directory
/media/fosterz/external_primary/files/projects/work/current/pathogensurveillance/work
Project directory
/media/fosterz/external_primary/files/projects/work/current/pathogensurveillance
Script name
main.nf
Script ID
fc63946d85f24c7e9743ed2487ad142c
Workflow session
bbbcea45-40ad-4949-8a6d-e6fdf2489e22
Workflow profile
test_medium,conda
Nextflow version
version 23.04.1, build 5866 (15-04-2023 06:51 UTC)

Resource Usage

These plots give an overview of the distribution of resource usage for each process.

CPU

Memory

Job Duration

I/O

Tasks

This table shows information about each task in the workflow. Use the search box on the right to filter rows for specific values. Clicking headers will sort the table by that value and scrolling side to side will reveal more columns.

(tasks table omitted because the dataset is too big)